Latest update, Apr 28, 2017

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##   README   ##
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This .zip file contains 3 files: 2 PLINK files containing the genotype information and one residual file containing the phenotypic information used for this paper.

- genabelLATT.tped -> Transposed ped file in PLINK format. Genotypes are already edited for MAF as declared in the paper.
- genabelLATT.tmap -> Transposed map file in PLINK format, containing 529 individuals.
- RESIDUALS.txt  -> File containing the residuals used for the GWAS in this paper.
                    The model used to obtain this data from raw files was:
					Lact_record ~ Farm + CalvYear + CalvMonth + CalvingNumber + Age + Polygenic_effect + e
					The "e" term was then used as dependent variable in a GWAS using qtscore function in GENABEL.

